It won't be cheap that's for sure. Air Canada and West Jet I think are the only two airlines that fly to PEI. Look into flying into and connecting out of Halifax Nova Scotia or Montreal Quebec.
Of the 3 locations Jacksonville will probably be the cheapest. Can you fly out of Atlanta? Are you just coming to PEI? I just flew this month Ch'town to Atlanta and Air Canada had good connections and ticket was approx. $600. Air Canada has a sale on till June 2nd that might apply to your dates.
Also Continental flys into Moncton, NB and Halifax, NS then a 2 or 3 1/2 hour drive from those locations to Ch'town
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